Unlock the secrets hidden in your protein simulations! In this tutorial, we walk you through the step-by-step process of extracting representative protein structures from the Free Energy Landscape (FEL) using GROMACS trajectory data. Learn how to identify energy minima, map conformational clusters, and extract the most relevant structures that define your system’s dynamics. Perfect for researchers working on molecular dynamics, protein folding, drug design, or biomolecular simulations.
We’ll cover FEL generation, interpretation, and structure extraction using tools like GROMACS, QtGrace, and visualization methods to make your results publication-ready. Whether you're a beginner or an experienced user, this tutorial simplifies a complex task with clear visuals and expert tips.
#gromacs #FEL #ProteinSimulation #Bioinformatics #MolecularDynamics
