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Root phenotyping: measuring roots with ImageJ SmartRoot plugin

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Feb 28, 2023
7:01

PS: You need to pay attention to the scale function to correspond the pixels to the centimeters. I tried to make this little tutorial to present an interesting plugin when you want to measure secondary or tertiary roots in addition to the primary. The data analysis is easy afterwards with the CSV file. If there is a correction to make, put it in comment, thank you. Lobet G, Pages L, Draye X (2011) A Novel Image Analysis Toolbox Enabling Quantitative Analyses of Root System Architecture Plant Physiology, Vol. 157, pp 29-39 #imagej #fiji #plugin #smartroot #phenotyping #phenotypage #racine #root #roots Music: audiohub.com/song/right-away

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Root phenotyping: measuring roots with ImageJ SmartRoot plugin | NatokHD