Biostatsquid

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50 videos

Welcome to Biostatsquid! My name is Laura, I am a bioinformatician who loves finding new ways to analyse and visualise biological data - from scRNAseq to pro...

Latest Videos

Cross-Validation in Machine Learning

Beta diversity Jaccard, Bray-Curtis, NMDS, PCoA and PERMANOVA

Diversity metrics easily explained Shannon, Simpson, Gini, Chao1 and Hill numbers!

Comparing single-cell integration methods - which one should you use

Single-cell integration methods easily explained!

Create an MA plot in R easy step-by-step tutorial

How to interpret MA plots easily explained!

EASY Heatmaps with ComplexHeatmap() in R

ANOVA (analysis of variance) easily explained!

EASY scRNAseq DGE analysis tutorial in R

EASY single-cell RNAseq DGE analysis methods and when to use them

Seurat v5 structure and main workflow easily explained!

PCA vs UMAP vs t-SNE and when to use them

UMAP - simple explanation with an example!

t-SNE - simple explanation with an example!

PCA - simple explanation with an example!

Easy p-values with an example

Detect and remove doublets in R (scRNAseq)

Easy DoubletFinder tutorial in R (scRNAseq)

Easy doublet detection in R with scDoubletFinder (scRNAseq)

How does doublet finder work Easy explanation!

Violin plots tutorial with ggplot2 in R (part 2)

Violin plots tutorial with ggplot2 in R (part 1)

EASY violin plots and boxplots - simple explanation with examples

How to interpret density plots - simple explanation with examples!

Logistic regression - easily explained with an example!

SingleR EASY TUTORIAL step-by-step cell type annotation in R

COMPLETE SURVIVAL ANALYSIS tutorial in R Kaplan-Meier, Cox regression, Forest Plots...

COX REGRESSION and HAZARD RATIOS - easily explained with an example!

LOG RANK TEST for survival analysis - easily explained with an example!