Advanced Protein Alignment and Superposition

This video shows how to align and superpose multiple proteins, handle multiple chains, use dendrograms and other visualization tools to help with interactive analyses. 0:57 Organizing chains in the Sequence Editor 1:40 Annotating the sequence 3:20 Displaying sequence similarity in the Sequence Editor 4:10 Defining alignment groups using Set Up Chains 6:00 Aligning by sequence only 6:42 Defining superposition groups using Set Up Chains 9:00 Exploring structural superposition options 10:08 Analyzing sequences using Dendrograms 11:35 Analyzing superposition using Plot RMSD 12:33 Aligning an additional structure to an existing alignment 14:04 Defining blocks for group-to-group alignments __________________________________________________________________________________________________ Subscribe to our YouTube channel for updates: https://bit.ly/3ICXK0W Visit CCG at https://www.chemcomp.com/ Listen to our podcast: https://bit.ly/3WQGPKY Follow us on LinkedIn: https://www.linkedin.com/company/chemical-computing-group/ X: https://twitter.com/CCG_MOE/