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Bioinformatics COVID-19 Genome Sequence Analysis using Biopython

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Premiered Dec 18, 2021
5:46

#12daysofbiopython In Day 5 of 12 days of Biopython video I am going to show you how to get COVID-19 genome sequence using Biopython and how to do brief analysis of COVID-19 genome using functions from Biopython. Feel free to skip to chapter of your interest. Chapters: 0:00 Intro 0:30 Entrez efetch() function for fetching coronavirus genome 1:09 Checking sequence length, molecular weight and GC content of covid-19 genome 1:40 Distribution of nucleotides in the genome 2:28 Transcription and translation 3:05 Distribution of amino acids in the genome 4:27 Proteins in covid genome 4:52 Longest protein in covid genome and saving it to FASTA file 5:09 Summary of findings 5:37 Outro You can find code/notebook connected to the topic here: Github code: https://github.com/lanacaldarevic/12-days-of-biopython/blob/main/12_days_of_biopython/day_05/day_05-covid_analysis_biopython.ipynb My channel is aimed at everyone interested in Computer Science applications in biology. The mission is to simplify Bioinformatics concepts, one video at a time! Stay productive! Follow me on Twitter: https://twitter.com/lana_caldarevic

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Bioinformatics COVID-19 Genome Sequence Analysis using Biopython | NatokHD