Galaxy Tutorial on using CIRCOS to visualize Genome Assembly Coverage
Generate Plot for Genome Assembly Coverage by Running Circos on Galaxy Genome assembly, mapping reads back to the assembly, getting number reads mapping to each contig of interest Get the input files here: :https://github.com/vappiah/bioinformatics-tutorials/tree/main/visualizations/circos/episode-3-genome-assembly-coverage Run circos on the commandline: https://youtu.be/e2rwNEMMvDQ 03:18 generate ideogram plot 08:53 generate coverage plot Support My Work https://www.patreon.com/bigdataanalytics https://www.buymeacoffee.com/informatician Buy Me a Coffee https://www.buymeacoffee.com/informatician Get more bioinformatics tutorials on Patreon: https://www.patreon.com/bigdataanalytics Teaching(Video Conferencing): https://calendly.com/bioinformaticscoach Consultation(Video Conferencing): https://calendly.com/bioinformaticscoach Consultation(Audio Call): https://clarity.fm/vincentappiah Subscribe to my channels Bioinformatics: https://www.youtube.com/channel/UCOJM9xzqDc6-43j2x_vXqCQ Data Science: https://www.youtube.com/channel/UC3bjbWYK7S_FLW0y0Ux4tyQ Short Clips: https://www.youtube.com/channel/UCrJE3zmKNdkmPsh_6TIPIIg Reach out [email protected] bioinformatics for beginners bioinformatics tutorial bioinformatics course Bioinformatics Project #bioinformaticsforbeginners #bioinformatics #bioinformática #linuxforbeginners #linux
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