Genetic Correlation Using Python
How to calculate the genetic correlation between phenotypes from two genome-wide association studies. Thanks for watching!! ❤️ // LDSC software https://github.com/bulik/ldsc // Python code https://github.com/mathetal/Python/blob/d1784b94453734247be47ae4e54968d588df5465/genetic_correlation.py // Psychiatric Genomics Consortium https://pgc.unc.edu/ // How to create a python2 environment https://stackoverflow.com/questions/24405561/how-to-install-two-versions-of-anaconda-python-2-and-3-on-mac-os // eur_w_ld_chr data https://ibg.colorado.edu/cdrom2021/Day06-nivard/GenomicSEM_practical/ // Timestamps 0:00 Introduction 1:27 LDSC python environment set-up 5:09 Munge summary statistics 13:33 Genetic correlation 15:58 Comparison to paper Tip Jar 💐 ☕️ https://ko-fi.com/mathetal ♫ Eric Skiff - Chibi Ninja https://freemusicarchive.org/music/Eric_Skiff/Resistor_Anthems/eric_skiff_-_03_-_chibi_ninja/
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