PolyPhen-2 Tutorial Series: Accessing Your Results

This tutorial demonstrates how to access query results from Polymorphism Phenotyping v2 (PolyPhen-2) through the Grid Gateway Interface (GGI). Bioinformatics applications, like PolyPhen-2, use a remote computer network or grid because a network of computers can analyze queries more quickly than an individual computer can. The GGI page displays information about the application, the status of the grid, a list of your completed jobs, and a list of your pending and running jobs. Want to practice applying this information? Check out the activities in our Sequence Comparison & Identity module on our website: https://www.jax.org/education-and-learning/high-school-students-and-undergraduates/teaching-the-genome-generation/stem-learning-resources?eduTopic=dff8d5d3-7b45-4af1-b0df-504053d7eef6 Or on LabXchange: https://www.labxchange.org/library/pathway/lx-pathway:430d9cc3-22f1-426c-885f-82119f469e64 PolyPhen-2: http://genetics.bwh.harvard.edu/pph2/ PolyPhen-2 Tutorial Series Playlist: https://www.youtube.com/playlist?list=PLWNp6Z5dXDZ61kvBXYlr60B6deiAVy-tj Genomic Education at The Jackson Laboratory: https://www.jax.org/education-and-learning Genetics Learning Resources from The Jackson Laboratory: https://www.jax.org/stem-resources Key moments: 0:00 Introduction 0:19 Accessing the Grid Gateway Interface 0:57 What is the Grid Gateway Interface (GGI)? 1:30 GGI page overview 2:05 Checking the grid status 3:13 Checking the status of your jobs 4:02 Refreshing the GGI page 4:30 Checking for errors 5:07 Accessing your results 5:27 Conclusion Keywords: PolyPhen-2, GGI